MDTE Tool

This is an online tool for identifying MDTEs with detailed annotations, and visualizing the positional relationship between miRNAs and TEs in figures.

Input your data here:
Parameters setting:
 
* The server just accepts the data which is less than 5000 lines. Current input lines : 0
Example: Click here
    

MDTE tool can be easily used.
        Firstly, the sequences of miRNAs or other non-coding RNAs should be prepared with their up- and downstream.
        Secondly, TEs can be identified from query sequences by RepeatMasker program.
         Finally, MDTEs will be identified from the result of RepeatMasker by MDTE tool.
More useful information can be found from help page.